Where to Stay in Labuan Bajo

A wooden pier extends into the calm blue water of Labuan Bajo, leading to a small covered structure. Dozens of boats float in the bay, with green hills and islands visible in the background under a clear sky.

Labuan Bajo has grown from a sleepy fishing town into one of Indonesia’s most exciting destinations. Whether you’re looking for a luxury resort overlooking the sea, a cozy boutique hotel, or a budget-friendly hostel in town, there’s an option for every traveler.

This guide will help you choose the right area and style of stay — and link you directly to our handpicked accommodations.

Best Areas to Stay in Labuan Bajo

Harbor Area (Central Location)

Perfect for first-time visitors. You’ll be close to restaurants, cafés, the night market, and departure points for island-hopping tours.

Best for: convenience, short stays, nightlife

Hilltop Stays (Scenic Views)

Hotels and villas set on the hills surrounding town offer the best sunset views over the Flores Sea.

Best for: honeymooners, couples, quiet escapes

Beachfront Resorts

Limited but spectacular — a few resorts sit directly on the water, offering private beaches and easy access to diving/snorkeling.

Best for: luxury travelers, families, water lovers

Near Komodo Airport

Ideal for a quick overnight or early flight. Mostly budget and mid-range stays.

Best for: transit travelers

Editor’s Picks (Featured Properties)

Travel Tips for Booking

  • High season: July–September & December. Book early!
  • Agoda & Booking.com often have discounted rates.
  • Many hotels offer tour packages or boat transfers.
  • Ask about airport shuttles — some are free, others charge a small fee.

Travel smarter, not harder

More Travel Planning Guides

Discover more guides to help you plan every step of your Labuan Bajo adventure, from arrival to accommodation and things to do.

View All

Frequently Asked Questions

  • Do hotels in Labuan Bajo include tours?

    Some do! Many mid-range and luxury hotels can arrange island-hopping or Komodo tours directly. Always ask when booking.

  • How much does accommodation cost in Labuan Bajo?

    • Budget: under US$20 per night
    • Mid-range: US$40–100
    • Luxury: US$150–500+

  • What’s the best budget accommodation in Labuan Bajo?

    Popular hostels like Seaesta and guesthouses near the harbor are excellent choices for backpackers and budget travelers.

  • Are there luxury hotels in Labuan Bajo?

    Yes. Resorts like Ayana Komodo and Sudamala Resort offer 5-star experiences with pools, spas, and ocean views.

  • What is the best area to stay in Labuan Bajo?

    The Harbor area is best for convenience and easy access to tours. For quiet and sunsets, choose hilltop hotels, and for luxury, pick a beachfront resort.